Summary page for FlybaseID: FBgn0085424 from the database of Drosophila TF DNA-binding Specificities
Gene Name nubbin
Gene Symbol nub
Secondary ID CG34395
Synonyms CG15488 CG15489 CG6246 dOct1 dPOU19 dPOU-19 dPOU-19/pdm-1 FBgn0002970 FBgn0004393 FBgn0032438 FBgn0032440 nb Oct1 Oct-1 Pdm Pdm-1 PDM1 POU33F1 POU domain protein 1 twain twn
Protein ID A8DYZ8_DROME
Unipro ID A8DYZ8
FlyMine Link to FlyMine
Primary DNAbindingDomain Homeobox
Secondary DNAbindingDomain Pou
Pfam Domain Homeobox
Motif Frequency Matrix Other Information
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Motif frequency in Drosophila genome Genome Surveyor
Source B1H
Sequence Method SOLEXA
PubmedID
Vector omegaUV2zf
Inhibitor Concentration 5 mM
Inducer Concentration 10 μM
AA sequence of fragment

VASAAAARAAGEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDS

Motif Frequency Matrix Other Information
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Motif frequency in Drosophila genome Genome Surveyor
Source B1H
Sequence Method SANGER
PubmedID 18332042
Vector omegaUV2
Inhibitor Concentration 10 mM
Inducer Concentration 10 μM
AA sequence of fragment

RAAGEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINPSLDS

Motif Frequency Matrix Other Information
Logo
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Motif frequency in Drosophila genome Genome Surveyor
Source DNaseI
Sequence Method SANGER
PubmedID 15572468
Vector
Inhibitor Concentration
Inducer Concentration
AA sequence of fragment